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Table 1 Performance of several methods for predicting A*0201 binders.

From: Quantitative peptide binding motifs for 19 human and mouse MHC class I molecules derived using positional scanning combinatorial peptide libraries

Method

AUC

Rank

arbmatrixa

0.935

1

netmhcanna

0.934

2

hla_a2_smm

0.922

3

bimas

0.920

4

mapppB

0.920

4

mhcpathwaya

0.915

6

multipredann

0.883

7

mapppS

0.871

8

syfpeithi

0.871

8

rankpep

0.836

10

hlaligand

0.816

11

mhcpred

0.814

12

svmhc

0.814

12

multipredhmm

0.796

14

pepdist

0.789

15

predep

0.788

16

Average

0.864

 

Median

0.871

 

Combinatorial library

0.909

 
  1. 1. With the exception of the positional scanning combinatorial library, these data have been previously reported [47], and are shown here for reference purposes.