Figure 4

Demonstration of application of a binding window around a high affinity binding 15-mer. (A) Actual standardized binding affinity N-terminus of the 15-mer begins at the point plotted. (B) peptide movement window ± 4 amino acids and (C) a binding window of ± 7 amino acids. The fine line in panels B and C is identical to that plotted in A. Semi-transparent colors yellow = extracellular, green = transmembrane domains, and pink = intracellular predicted by Phobius. Protein: Thermonuclease precursor Staphylococcus aureus COL gi 57650135.