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Table 2 Size of AntiJen relative to JenPep. The number of peptides for each category in the AntiJen database is given, distinguishing between class I and class II categories, where appropriate. Growth versus JenPep 1 and 2, the progenitors of AntiJen, is included. For certain data categories, most obviously TAP binding data, re-evaluation of the quality of data within JenPep has seen it decrease rather than increase, however the expansion of the data is clearly seen.

From: AntiJen: a quantitative immunology database integrating functional, thermodynamic, kinetic, biophysical, and cellular data

DATABASE

JenPep v1.0

JenPep v2.0

AntiJen v1.0

AntiJen v2.0

 

Class 1

Class 2

Total

Class 1

Class 2

Total

Class 1

Class 2

TOTAL

Class 1

Class 2

TOTAL

T cell epitotes

1266

795

2061

2060

1158

3218

2247

1578

3825

2402

1585

4158

MHC peptide binding

3196

2652

5848

6411

5925

12336

6853

7772

14625

7304

8114

15454

TAP peptide binding

  

432

  

441

  

408

  

1106

B cell epitotes

     

816

  

1295

  

3541

TCR – peptide-MHC

     

49

375

124

594

527

253

782

MHC peptide kinetics

      

704

243

947

897

294

1150

IPPI

        

805

  

2675

Copy Number

         

161

243

414

Diffusion coefficients

           

759

Peptide Libraries

           

897

Antibody

           

395