Table 1 Avian β-defensins found in both the chicken and zebra finch genomes with their corresponding GenBank numbers.
A-defensin | Length chicken | Length zebra finch | GeneBank nr chicken | GeneBank nr zebra finch | Net charge ph 7.0 | Isoelectric point | Average hydrophility |
|---|---|---|---|---|---|---|---|
AvBD1 | 700 | NM_204993 | 7.7 | 9.9 | 0.1 | ||
AvBD 123 | 544 | BK006977 | 5.8 | 9.2 | 0.1 | ||
AvBD124 | 543 | BK006978 | 0.7 | 7.6 | 0 | ||
AvBD125 | 545 | BK006979 | 5.7 | 9.2 | 0.1 | ||
AvBD2c | 300 | 459 | NM_204992 | 3.9 | 8.6 | -0.3 | |
AvBD2z | 459 | BK006967 | 4.9 | 8.9 | -0.1 | ||
AvBD3 | 1200 | NM_204650 | 5.8 | 9.4 | -0.2 | ||
AvBD115 | 254 | BK006966 | 5.9 | 9.2 | 0 | ||
AvBD116 | 449 | BK006965 | 6.7 | 9.9 | 0.3 | ||
AvBD117α | 611 | BK006961 | 5.7 | 9.4 | -0.1 | ||
AvBD117β | 611 | BK006962 | 5.7 | 9.4 | -0.1 | ||
AvBD118 | 603 | BK006963 | 7.7 | 10 | 0.1 | ||
AvBD119 | 641 | BK006964 | 5.8 | 9.3 | -0.2 | ||
AvBD120 | 689 | BK006981 | 7.7 | 11 | 0.3 | ||
AvBD121 | 706 | BK006975 | 5.8 | 9.4 | -0.2 | ||
AvBD122 | 710 | BK006976 | 7.7 | 10.6 | 0 | ||
AvBD4c | 1350 | NM_001001610 | 5.8 | 9.1 | -0.3 | ||
AvBD4z | 1944 | BK006982 | 6.8 | 9.4 | -0.1 | ||
AvBD5c | 600 | NM_001001608 | 1.8 | 8 | 0.3 | ||
AvBD5z | 783 | BK006969 | 0.8 | 7.6 | 0.3 | ||
AvBD6c | 1650 | - | NM_001001193 | 5.8 | 9.2 | -0.6 | |
AvBD7c | 400 | NM_001001194 | 4.7 | 8.9 | -0.2 | ||
AvBD7z | 268 | BK006970 | 5.7 | 9.2 | -0.3 | ||
AvBD8c | 500 | NM_001001781 | 1.1 | 7.7 | 0.1 | ||
AvBD8z | 700 | BK006968 | 2.8 | 8.3 | 0.2 | ||
AvBD9c | 1800 | NM_001001611 | 3.8 | 8.6 | 0 | ||
AvBD9z | 2544 | BK006972 | 3.7 | 8.6 | 0 | ||
AvBD10c | 500 | NM_001001609 | 1.8 | 8 | -0.2 | ||
AvBD10z | 440 | BK006971 | 1.8 | 8 | 0 | ||
AvBD11c | 1200 | NM_001001779 | 4.8 | 8.9 | 0 | ||
AvBD11z | 1095 | BK006973 | 3.9 | 8.6 | 0 | ||
AvBD12c | 700 | NM_001001607 | -0.2 | 6.8 | 0 | ||
AvBD12z | 731 | BK006980 | -1.1 | 6 | -0.3 | ||
AvBD13c | 4700 | NM_001001780 | 4 | 8.6 | 0 | ||
AvBD13z | 1919 | BK006974 | 4.9 | 8.9 | 0.5 | ||
AvBD14 | - | AM 402954 | 6.7 | 9.6 | 0.1 |