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Figure 3 | Immunome Research

Figure 3

From: Stacking and energetic contribution of aromatic islands at the binding interface of antibody proteins

Figure 3

Stacking Conformation for aromatic residues in Aromatic Island The antigen protein is displayed with solvent surface mode. For better view, only the aromatic interfacial Tyr and Trp residues in AI are displayed with stick mode from the antibody. (A) Aromatic Island size of 4 at the binding interface of antibody 9D7 and IL-10 (PDB code 1lk3) (B) Aromatic Island size of 5 at the binding interface of antibody 33H1 and potassium channel molecule (PDB code 1ors) (C) Aromatic Island size of 6 at the binding interface of antibody and cytochrome AA3 (PDB code 1ar1) (D) Aromatic Island size of 7 at the binding interface of antibody YTS 105.18 and T-cell surface glycoprotein CD8 alpha chain (PDB code 2arj) (E) Aromatic Island size of 8 at the binding interface of antibody HyHEL-26 and HEL (PDB code 1ndm) (F) Aromatic Island size of 9 at the binding interface of antibody HyHEL-10 mutant and HEL (PDB code 2eiz)

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