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Figure 2 | Immunome Research

Figure 2

From: pDOCK: a new technique for rapid and accurate docking of peptide ligands to Major Histocompatibility Complexes

Figure 2

Distribution of Cα RMSD of the docked peptides and their respective crystal structures across the non-redundant MPID-T2 dataset for peptides for a. MHC-I complexes and b. MHC-II complexes. Most of the peptides from both MHC-I (124/149; 83%) and MHC-II (35/37; ~95%) datasets have their Cα RMSD values below 1.00 Å, highlighting the accuracy of our docking protocol. The number of peptides in each Cα RMSD range is given in parentheses.

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