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Table 4 Peptide coverage of neutralizing epitopes.

From: Concept and application of a computational vaccinology workflow

protein

baseline

number of peptides selected

percentage (%) of protein covered

number of potentially neutralizing peptides selected

coverage of known neutralizing epitopes

gp110

5.72%

12

19.49%

2

2/3 = 66%

gp350

12.35%

20

35.17%

5

4/4 = 100%

  1. Table 4 gives the number of selected peptides (and percentage of entire protein covered by these) in combination with the percentage of residues belonging to neutralizing epitopes and coverage of known neutralizing epitopes as an indicator of selection effectiveness for gp110 and gp350. A definition of the baseline is given in Table 3.