Table 1 AntiJen sub-databases and content.

T Cell Epitopes

Contains T Cell epitope peptides (known binders).

B Cell Epitopes

Contains B Cell linear and conformational epitope peptides.

MHC-Peptide

Binding data relating to antigenic peptides and MHC interactions.

TCR

Binding data relating to antigenic peptides – TCR – MHC interactions.

TAP

Binding data relating to antigenic peptides and TAP interactions.

Kinetics

Kinetic binding data for MHC peptide interactions.

IPPI

Binding data for a collection of immunological protein interactions.

Diffusion Coefficient

Collection of Diffusion and Friction coefficients for surface peptides.

Copy Number

Number/Abundance of cell surface molecules.

Peptide Libraries

Relative binding data for antigenic peptide amino acid substitutions.

Antibody-Peptide

A variety of antibodies known to bind proteins.